Halorubrum sp. ASP1

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. ASP1 is a rod-shaped archaeon notable for its unique adaptations to extreme environments. This microorganism possesses flagella, which facilitate motility, allowing it to navigate its habitat effectively. Halorubrum sp. ASP1 has a single replicon, indicating a streamlined genomic organization, which may contribute to its efficiency in responding to environmental stresses. The accession number for Halorubrum sp. ASP1 is SGUA00000000.1, which provides a reference point for genomic and phenotypic studies. The presence of flagella is particularly significant, as it suggests that this organism may have evolved mechanisms for survival and proliferation in challenging environments, such as high salinity or extreme temperatures. In an ecological context, Halorubrum sp. ASP1 likely plays a role in biogeochemical cycles within its habitat, contributing to the microbial community's dynamics. Its motility could enhance its ability to colonize diverse niches, interact with other microorganisms, and participate in nutrient cycling. Understanding the traits of Halorubrum sp. ASP1 not only sheds light on its physiological capabilities but also underscores the complexity of microbial life in extreme ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. ASP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. ASP1 NODE_114_length_209_cov_1951.560976, whole

Gene Summary

Adenine Count

586079 bp

Thymine Count

596367 bp

Guanine Count

1218580 bp

Cytosine Count

1222449 bp

Genome Length

3631817 bp

Protein-coding Genes

3477 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinEXE48_10715Not AvailableNegative2097659 - 209805114832.4
hypothetical proteinEXE48_10720Not AvailableNegative2098048 - 20982909214.47
hypothetical proteinEXE48_10725Not AvailableNegative2098367 - 20986279688.96
2fe-2s iron-sulfur cluster binding domain-containing proteinEXE48_10730Not AvailablePositive2098785 - 209912611925.6
asch domain-containing proteinEXE48_10735Not AvailableNegative2099183 - 209950311960.5
aspartate carbamoyltransferaseEXE48_10740Not AvailablePositive2099693 - 210063434623.2
aspartate carbamoyltransferase regulatory subunitEXE48_10745Not AvailablePositive2100631 - 210108916484.6
hypothetical proteinEXE48_10750Not AvailablePositive2101415 - 210227532232.9
trehalose utilization protein thuaEXE48_10755Not AvailableNegative2102454 - 210319727922.2
hypothetical proteinEXE48_10760Not AvailablePositive2103290 - 21035057725.38

Displaying genes 2091 – 2100 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.