Halorubrum sp. ASP1

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. ASP1 is a rod-shaped archaeon notable for its unique adaptations to extreme environments. This microorganism possesses flagella, which facilitate motility, allowing it to navigate its habitat effectively. Halorubrum sp. ASP1 has a single replicon, indicating a streamlined genomic organization, which may contribute to its efficiency in responding to environmental stresses. The accession number for Halorubrum sp. ASP1 is SGUA00000000.1, which provides a reference point for genomic and phenotypic studies. The presence of flagella is particularly significant, as it suggests that this organism may have evolved mechanisms for survival and proliferation in challenging environments, such as high salinity or extreme temperatures. In an ecological context, Halorubrum sp. ASP1 likely plays a role in biogeochemical cycles within its habitat, contributing to the microbial community's dynamics. Its motility could enhance its ability to colonize diverse niches, interact with other microorganisms, and participate in nutrient cycling. Understanding the traits of Halorubrum sp. ASP1 not only sheds light on its physiological capabilities but also underscores the complexity of microbial life in extreme ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. ASP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. ASP1 NODE_114_length_209_cov_1951.560976, whole

Gene Summary

Adenine Count

586079 bp

Thymine Count

596367 bp

Guanine Count

1218580 bp

Cytosine Count

1222449 bp

Genome Length

3631817 bp

Protein-coding Genes

3477 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s5EXE48_06290Not AvailablePositive1261042 - 126168923240.2
50s ribosomal protein l30EXE48_06295Not AvailablePositive1261689 - 126215316811.5
50s ribosomal protein l15EXE48_06300Not AvailablePositive1262150 - 126264717793.2
preprotein translocase subunit secyEXE48_06305Not AvailablePositive1262649 - 126413053115.6
universal stress proteinEXE48_06310Not AvailablePositive1264241 - 126494825705.9
duf445 family proteinEXE48_06315Not AvailableNegative1265054 - 126592931787.6
trna (guanine(26)-n(2))-dimethyltransferaseEXE48_06320Not AvailablePositive1266121 - 126725140499.1
yihy/virulence factor brkb family proteinEXE48_06325Not AvailablePositive1267330 - 126864345723.4
phosphatase pap2 family proteinEXE48_06330Not AvailablePositive1268689 - 126966332316.2
type i glutamate--ammonia ligaseEXE48_06335Not AvailableNegative1269802 - 127117250057.6

Displaying genes 1251 – 1260 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.