Loktanella sp. IMCC34160

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Loktanella

Description

Loktanella sp. IMCC34160 is a bacterial strain characterized by having a single replicon. This trait indicates a streamlined genomic organization, which can be an advantage in various ecological niches. The strain is cataloged under the accession number SELP00000000.1, which provides a reference point for its genomic data. Understanding the characteristics of Loktanella sp. IMCC34160 can provide insights into its ecological roles, particularly in marine environments where members of the Loktanella genus are often found. These bacteria are typically associated with marine habitats and may play significant roles in nutrient cycling and organic matter degradation. The presence of a single replicon may suggest that Loktanella sp. IMCC34160 has optimized its genomic structure for efficiency, potentially allowing for rapid adaptation to changing environmental conditions. This adaptability can be crucial in marine ecosystems, where fluctuations in nutrient availability and other environmental factors occur frequently. Overall, the genomic simplicity of Loktanella sp. IMCC34160, as indicated by its single replicon, may enhance its ecological versatility, enabling it to thrive in diverse marine environments. Further research into its metabolic capabilities and ecological interactions could provide deeper insights into its role within marine microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLoktanella
SpeciesLoktanella sp. IMCC34160
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella sp. IMCC34160 NODE_491_length_255_cov_169.187500, whole

Gene Summary

Adenine Count

695535 bp

Thymine Count

707226 bp

Guanine Count

1201239 bp

Cytosine Count

1172125 bp

Genome Length

3777745 bp

Protein-coding Genes

3597 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i secretion system permease/atpaseEU803_09295Not AvailableNegative1901226 - 190296261885.1
vacj family lipoproteinEU803_09300Not AvailablePositive1903176 - 190396728100.8
abc transporter substrate-binding proteinEU803_09305Not AvailablePositive1903964 - 190455421714.2
hypothetical proteinEU803_09310Not AvailablePositive1904555 - 190492013474.2
glutathione s-transferase family proteinEU803_09315Not AvailableNegative1904925 - 190552722140.6
fmn-binding negative transcriptional regulatorEU803_09320Not AvailableNegative1905524 - 190617123279.9
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabEU803_09330Not AvailableNegative1906838 - 190809145843.4
diaminopimelate epimeraseEU803_09335Not AvailableNegative1908092 - 190890729127.6
Trna-lysNot AvailableNot AvailablePositive1909004 - 1909079Not Available
Trna-thrNot AvailableNot AvailablePositive1909174 - 1909249Not Available

Displaying genes 1851 – 1860 of 3665 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.