Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2270 domain-containing protein | EU800_04960 | Not Available | Positive | 1046841 - 1047470 | 23857.2 |
| lps export abc transporter permease lptf | EU800_04965 | Not Available | Positive | 1047613 - 1048743 | 41748.9 |
| lps export abc transporter permease lptg | EU800_04970 | Not Available | Positive | 1048740 - 1049834 | 40026.0 |
| lps-assembly protein lptd | EU800_04975 | Not Available | Positive | 1049834 - 1051978 | 81128.6 |
| peptidylprolyl isomerase | EU800_04980 | Not Available | Positive | 1052089 - 1053351 | 45095.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EU800_04985 | Not Available | Positive | 1053351 - 1054346 | 34024.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EU800_04990 | Not Available | Positive | 1054444 - 1055295 | 29975.7 |
| duf808 domain-containing protein | EU800_04995 | Not Available | Negative | 1055306 - 1056319 | 34725.1 |
| pantetheine-phosphate adenylyltransferase | EU800_05000 | Not Available | Negative | 1056593 - 1057093 | 18385.6 |
| cbs domain-containing protein | EU800_05005 | Not Available | Negative | 1057243 - 1057677 | 15577.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
