Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01459 family had-type hydrolase | EU800_24570 | Not Available | Positive | 5124037 - 5124939 | 32575.4 |
| lysr family transcriptional regulator | EU800_24575 | Not Available | Positive | 5125056 - 5125982 | 33693.1 |
| alpha-n-arabinofuranosidase | EU800_24580 | Not Available | Positive | 5126090 - 5127607 | 57337.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EU800_24585 | Not Available | Positive | 5127646 - 5128731 | 39371.4 |
| extracellular solute-binding protein | EU800_24590 | Not Available | Positive | 5128770 - 5130047 | 46008.1 |
| sugar abc transporter permease | EU800_24595 | Not Available | Positive | 5130116 - 5130997 | 33776.3 |
| carbohydrate abc transporter permease | EU800_24600 | Not Available | Positive | 5130994 - 5131339 | 12927.2 |
| hypothetical protein | EU800_24605 | Not Available | Positive | 5131340 - 5131763 | 15079.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EU800_24610 | Not Available | Negative | 5132078 - 5133157 | 38766.7 |
| winged helix-turn-helix transcriptional regulator | EU800_24615 | Not Available | Positive | 5133281 - 5134060 | 29465.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
