Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EU800_21990 | Not Available | Negative | 4590000 - 4591604 | 58659.9 |
| pbp1a family penicillin-binding protein | EU800_21995 | Not Available | Negative | 4591641 - 4594157 | 92183.0 |
| class i sam-dependent methyltransferase | EU800_22000 | Not Available | Positive | 4594373 - 4594987 | 21460.4 |
| n-acetylmuramoyl-l-alanine amidase | EU800_22005 | Not Available | Negative | 4594974 - 4596170 | 42420.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EU800_22010 | Not Available | Negative | 4596324 - 4597463 | 40944.1 |
| dsba family protein | EU800_22015 | Not Available | Positive | 4597673 - 4598422 | 26841.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EU800_22020 | Not Available | Negative | 4598461 - 4599582 | 39575.6 |
| helix-turn-helix domain-containing protein | EU800_22025 | Not Available | Negative | 4599720 - 4601051 | 45811.0 |
| 5-aminolevulinate synthase | EU800_22030 | Not Available | Negative | 4601166 - 4602371 | 43779.6 |
| 5-aminolevulic acid synthase | EU800_22035 | Not Available | Negative | 4602524 - 4603120 | 19984.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
