Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vplpa-cterm sorting domain-containing protein | EU800_20170 | Not Available | Negative | 4196832 - 4197398 | 19773.4 |
| vplpa-cterm sorting domain-containing protein | EU800_20175 | Not Available | Negative | 4197949 - 4198623 | 23041.6 |
| glycosyl transferase | EU800_20180 | Not Available | Negative | 4198808 - 4200028 | 45873.9 |
| mannosyl-3-phosphoglycerate phosphatase | EU800_20185 | Not Available | Negative | 4200040 - 4200819 | 27311.7 |
| abc transporter permease subunit | EU800_20190 | Not Available | Negative | 4200830 - 4201588 | 27380.4 |
| abc transporter atp-binding protein | EU800_20195 | Not Available | Negative | 4201585 - 4202394 | 29724.1 |
| abc transporter substrate-binding protein | EU800_20200 | Not Available | Negative | 4202474 - 4203484 | 35382.1 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | EU800_20205 | Not Available | Negative | 4203740 - 4205719 | 71158.0 |
| nad(+) diphosphatase | EU800_20210 | Not Available | Positive | 4205885 - 4206853 | 34984.8 |
| pyridoxamine 5'-phosphate oxidase family protein | EU800_20215 | Not Available | Negative | 4206927 - 4207598 | 25087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
