Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-coa dehydrogenase large subunit | EU800_01715 | Not Available | Positive | 370374 - 371531 | 43013.8 |
| hypothetical protein | EU800_01720 | Not Available | Positive | 371544 - 372671 | 39617.9 |
| fadr family transcriptional regulator | EU800_01725 | Not Available | Negative | 372709 - 373653 | 35494.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | EU800_01730 | Not Available | Positive | 373591 - 374787 | 44498.2 |
| sdr family oxidoreductase | EU800_01735 | Not Available | Positive | 374798 - 375565 | 27112.8 |
| l-idonate 5-dehydrogenase | EU800_01740 | Not Available | Positive | 375567 - 376610 | 36258.0 |
| trap transporter substrate-binding protein | EU800_01745 | Not Available | Positive | 376651 - 377664 | 36493.9 |
| trap transporter small permease | EU800_01750 | Not Available | Positive | 377741 - 378334 | 21819.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 378029 - 378399 | Not Available |
| trap transporter large permease subunit | EU800_01755 | Not Available | Positive | 378334 - 379659 | 46864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
