Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EU800_18495 | Not Available | Positive | 3839388 - 3840425 | 37683.1 |
| atp-binding cassette domain-containing protein | EU800_18500 | Not Available | Positive | 3840422 - 3841423 | 36512.1 |
| duf4976 domain-containing protein | EU800_18505 | Not Available | Positive | 3841318 - 3842694 | 51335.3 |
| sulfatase | EU800_18510 | Not Available | Negative | 3842691 - 3844196 | 54789.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | EU800_18515 | Not Available | Negative | 3844203 - 3845381 | 41028.8 |
| m81 family peptidase | EU800_18520 | Not Available | Negative | 3845378 - 3846874 | 53943.7 |
| peptidase m14 | EU800_18525 | Not Available | Negative | 3846887 - 3847912 | 36383.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | EU800_18530 | Not Available | Positive | 3848009 - 3849196 | 42708.1 |
| gamma-glutamyltransferase | EU800_18535 | Not Available | Positive | 3849193 - 3850797 | 57125.9 |
| efflux rnd transporter permease subunit | EU800_18540 | Not Available | Negative | 3851161 - 3854295 | 111711.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
