Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | EU800_18345 | Not Available | Negative | 3803115 - 3804161 | 36216.0 |
| duf952 domain-containing protein | EU800_18350 | Not Available | Negative | 3804158 - 3804496 | 12299.6 |
| multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase | EU800_18355 | Not Available | Positive | 3804637 - 3806208 | 55747.6 |
| sos response-associated peptidase | EU800_18360 | Not Available | Positive | 3806394 - 3807062 | 24372.3 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | EU800_18365 | Not Available | Positive | 3807254 - 3808201 | 33840.7 |
| nadph-dependent glutamate synthase | EU800_18370 | Not Available | Positive | 3808202 - 3809710 | 54475.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | EU800_18375 | Not Available | Positive | 3809745 - 3811652 | 68337.3 |
| 2-oxoglutarate oxidoreductase | EU800_18380 | Not Available | Positive | 3811649 - 3812635 | 36625.0 |
| ferredoxin | EU800_18385 | Not Available | Positive | 3812640 - 3814811 | 79154.2 |
| type ii 3-dehydroquinate dehydratase | EU800_18390 | Not Available | Positive | 3815093 - 3815533 | 16091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
