Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EU800_17270 | Not Available | Positive | 3580891 - 3581361 | 16739.3 |
| ydcf family protein | EU800_17275 | Not Available | Positive | 3581422 - 3582192 | 27638.5 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | EU800_17280 | Not Available | Positive | 3582307 - 3583836 | 54303.2 |
| peptidase m23 | EU800_17285 | Not Available | Positive | 3583833 - 3584969 | 39010.9 |
| s41 family peptidase | EU800_17290 | Not Available | Positive | 3584977 - 3586320 | 48286.6 |
| rna pyrophosphohydrolase | EU800_17295 | Not Available | Positive | 3586431 - 3586910 | 18392.9 |
| gdp-l-fucose synthase | EU800_17300 | Not Available | Negative | 3586914 - 3587888 | 35994.3 |
| gdp-mannose 4,6-dehydratase | EU800_17305 | Not Available | Negative | 3587885 - 3589018 | 42533.4 |
| hypothetical protein | EU800_17310 | Not Available | Negative | 3589179 - 3589952 | 27551.0 |
| dmt family transporter | EU800_17315 | Not Available | Positive | 3590067 - 3590960 | 30403.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
