Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | EU800_15645 | Not Available | Negative | 3257511 - 3258773 | 45625.8 |
| duf4170 domain-containing protein | EU800_15650 | Not Available | Negative | 3258782 - 3259024 | 9316.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EU800_15655 | Not Available | Negative | 3259124 - 3259900 | 27786.9 |
| tldd/pmba family protein | EU800_15660 | Not Available | Negative | 3259887 - 3261233 | 46315.4 |
| pdz domain-containing protein | EU800_15665 | Not Available | Positive | 3261375 - 3262757 | 48367.6 |
| hypothetical protein | EU800_15670 | Not Available | Positive | 3262920 - 3263462 | 19274.2 |
| ubiquinone biosynthesis protein ubib | EU800_15675 | Not Available | Positive | 3263659 - 3265338 | 62495.8 |
| duf2125 domain-containing protein | EU800_15680 | Not Available | Negative | 3265454 - 3266971 | 52323.6 |
| sdr family oxidoreductase | EU800_15685 | Not Available | Positive | 3267157 - 3267912 | 26399.7 |
| enoyl-coa hydratase/isomerase family protein | EU800_15690 | Not Available | Positive | 3267909 - 3268538 | 22072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
