Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp octopine/nopaline dehydrogenase | EU800_01405 | Not Available | Negative | 298713 - 299753 | 37300.8 |
| c4-dicarboxylate abc transporter permease | EU800_01410 | Not Available | Negative | 299822 - 301345 | 53942.9 |
| tripartite tricarboxylate transporter tctb family protein | EU800_01415 | Not Available | Negative | 301338 - 301835 | 18133.5 |
| tripartite tricarboxylate transporter substrate binding protein | EU800_01420 | Not Available | Negative | 301911 - 302840 | 32180.9 |
| nad(p)/fad-dependent oxidoreductase | EU800_01425 | Not Available | Negative | 302982 - 304439 | 52745.9 |
| alkylhydroperoxidase | EU800_01430 | Not Available | Negative | 304436 - 305023 | 21007.3 |
| hypothetical protein | EU800_01435 | Not Available | Negative | 305020 - 305508 | 17019.5 |
| lysr family transcriptional regulator | EU800_01440 | Not Available | Positive | 305631 - 306611 | 35156.4 |
| lysr family transcriptional regulator | EU800_01445 | Not Available | Negative | 306641 - 307561 | 33989.2 |
| uroporphyrinogen decarboxylase | EU800_01450 | Not Available | Positive | 307694 - 308728 | 37817.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
