Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate enol-lactonase | EU800_01205 | Not Available | Positive | 253017 - 253805 | 27694.4 |
| 4-carboxymuconolactone decarboxylase | EU800_01210 | Not Available | Positive | 253798 - 254175 | 13893.6 |
| protocatechuate 3,4-dioxygenase subunit beta | EU800_01215 | Not Available | Positive | 254213 - 254932 | 27042.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | EU800_01220 | Not Available | Positive | 254944 - 255636 | 25754.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | EU800_01225 | Not Available | Positive | 255858 - 256919 | 37479.4 |
| duf1194 domain-containing protein | EU800_01230 | Not Available | Negative | 256930 - 257736 | 29707.4 |
| yeee/yede family protein | EU800_01235 | Not Available | Positive | 257903 - 258994 | 37343.4 |
| cation-transporting p-type atpase | EU800_01240 | Not Available | Positive | 259352 - 262066 | 95736.2 |
| iron-sulfur cluster carrier protein apbc | EU800_01245 | Not Available | Negative | 262101 - 263204 | 39836.8 |
| dibenzothiophene desulfurase | EU800_01250 | Not Available | Negative | 263237 - 264109 | 30366.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
