Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EU800_13110 | Not Available | Positive | 2731440 - 2734142 | 98216.3 |
| type vi secretion system tip protein vgrg | EU800_13115 | Not Available | Positive | 2734220 - 2736385 | 81928.1 |
| hypothetical protein | EU800_13120 | Not Available | Positive | 2736395 - 2736994 | 20600.7 |
| type vi secretion system-associated fha domain protein tagh | EU800_13125 | Not Available | Positive | 2737069 - 2738724 | 58030.8 |
| type vi secretion system baseplate subunit tssk | EU800_13130 | Not Available | Positive | 2738744 - 2740081 | 48938.2 |
| type vi secretion system protein tssl | EU800_13135 | Not Available | Positive | 2740103 - 2741533 | 51489.1 |
| type vi secretion system membrane subunit tssm | EU800_13140 | Not Available | Positive | 2741533 - 2745102 | 131567.0 |
| type vi secretion system-associated protein tagf | EU800_13145 | Not Available | Positive | 2745084 - 2745740 | 23796.5 |
| serine/threonine-protein phosphatase | EU800_13150 | Not Available | Positive | 2745737 - 2746450 | 25988.1 |
| hypothetical protein | EU800_13155 | Not Available | Negative | 2746463 - 2746681 | 8493.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
