Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | EU800_13060 | Not Available | Negative | 2722138 - 2722764 | 21211.4 |
| hypothetical protein | EU800_13065 | Not Available | Negative | 2722769 - 2723230 | 16211.5 |
| type vi secretion system protein tssa | EU800_13070 | Not Available | Positive | 2723324 - 2724439 | 39831.1 |
| type vi secretion system contractile sheath small subunit | EU800_13075 | Not Available | Positive | 2724491 - 2725012 | 19097.8 |
| type vi secretion system contractile sheath large subunit | EU800_13080 | Not Available | Positive | 2725016 - 2726512 | 55970.9 |
| type vi secretion system tube protein hcp | EU800_13085 | Not Available | Positive | 2726595 - 2727080 | 17466.6 |
| virulence protein scie type | EU800_13090 | Not Available | Positive | 2726986 - 2728029 | 37365.6 |
| type vi secretion system baseplate subunit tsse | EU800_13095 | Not Available | Positive | 2728034 - 2728531 | 18792.2 |
| type vi secretion system baseplate subunit tssf | EU800_13100 | Not Available | Positive | 2728536 - 2730410 | 69555.3 |
| type vi secretion system baseplate subunit tssg | EU800_13105 | Not Available | Positive | 2730374 - 2731405 | 37952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
