Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EU800_12860 | Not Available | Positive | 2676941 - 2678263 | 47950.9 |
| sugar abc transporter permease | EU800_12865 | Not Available | Positive | 2678404 - 2679276 | 31961.3 |
| carbohydrate abc transporter permease | EU800_12870 | Not Available | Positive | 2679290 - 2680123 | 30777.6 |
| abc transporter atp-binding protein | EU800_12875 | Not Available | Positive | 2680135 - 2681136 | 36464.9 |
| l-iditol 2-dehydrogenase | EU800_12880 | Not Available | Positive | 2681133 - 2681906 | 26683.1 |
| sdr family oxidoreductase | EU800_12885 | Not Available | Positive | 2681918 - 2682697 | 27381.4 |
| mannitol dehydrogenase family protein | EU800_12890 | Not Available | Positive | 2682710 - 2684182 | 53817.7 |
| zinc-binding dehydrogenase | EU800_12895 | Not Available | Positive | 2684194 - 2685186 | 34782.0 |
| methylglyoxal synthase | EU800_12900 | Not Available | Positive | 2685316 - 2685738 | 14842.9 |
| dna polymerase iv | EU800_12905 | Not Available | Negative | 2685746 - 2686999 | 46106.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
