Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | EU800_11890 | Not Available | Positive | 2482387 - 2483919 | 54528.9 |
| dha2 family efflux mfs transporter permease subunit | EU800_11895 | Not Available | Positive | 2483988 - 2485463 | 52995.2 |
| polyribonucleotide nucleotidyltransferase | EU800_11900 | Not Available | Positive | 2485770 - 2487905 | 77072.4 |
| 1-phosphofructokinase | EU800_11905 | Not Available | Negative | 2488082 - 2489038 | 33608.5 |
| saccharopine dehydrogenase | EU800_11910 | Not Available | Positive | 2489215 - 2490270 | 37583.9 |
| saccharopine dehydrogenase | EU800_11915 | Not Available | Positive | 2490280 - 2491425 | 42032.6 |
| duf3775 domain-containing protein | EU800_11920 | Not Available | Negative | 2491496 - 2491822 | 11961.0 |
| sdr family nad(p)-dependent oxidoreductase | EU800_11925 | Not Available | Negative | 2491994 - 2492722 | 26112.9 |
| fad-dependent oxidoreductase | EU800_11930 | Not Available | Negative | 2492722 - 2494026 | 47961.0 |
| sigma-70 family rna polymerase sigma factor | EU800_11935 | Not Available | Positive | 2494131 - 2494778 | 23797.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
