Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | EU800_11185 | Not Available | Positive | 2342092 - 2342673 | 21480.4 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EU800_11190 | Not Available | Positive | 2342946 - 2344082 | 40982.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | EU800_11195 | Not Available | Positive | 2344089 - 2344649 | 19687.4 |
| transcription antitermination factor nusb | EU800_11200 | Not Available | Positive | 2344646 - 2345101 | 17088.4 |
| lytic transglycosylase domain-containing protein | EU800_11205 | Not Available | Positive | 2345253 - 2346212 | 34427.1 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | EU800_11210 | Not Available | Negative | 2346235 - 2347011 | 28138.7 |
| cytochrome c-type biogenesis protein ccmh | EU800_11215 | Not Available | Negative | 2347092 - 2347559 | 16716.2 |
| heme lyase ccmf/nrfe family subunit | EU800_11220 | Not Available | Negative | 2347556 - 2349538 | 71513.0 |
| hypothetical protein | EU800_11225 | Not Available | Negative | 2349675 - 2349860 | 6518.15 |
| d-galactarate dehydratase | EU800_11230 | Not Available | Negative | 2349965 - 2350306 | 11640.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
