Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EU800_08955 | Not Available | Negative | 1885558 - 1886643 | 38575.4 |
| 3-dehydroquinate synthase | EU800_08960 | Not Available | Negative | 1887209 - 1888324 | 39968.7 |
| shikimate kinase | EU800_08965 | Not Available | Negative | 1888328 - 1889017 | 24867.2 |
| hypothetical protein | EU800_08970 | Not Available | Positive | 1889155 - 1890684 | 52678.4 |
| site-specific tyrosine recombinase xerd | EU800_08975 | Not Available | Positive | 1890681 - 1891619 | 34432.3 |
| fad-dependent oxidoreductase | EU800_08980 | Not Available | Negative | 1891638 - 1892810 | 41317.9 |
| rna polymerase-binding protein dksa | EU800_08985 | Not Available | Negative | 1892911 - 1893333 | 16534.2 |
| moxr family atpase | EU800_08990 | Not Available | Positive | 1893553 - 1894392 | 31880.3 |
| transcriptional repressor | EU800_08995 | Not Available | Positive | 1894657 - 1895070 | 15685.6 |
| dmt family transporter | EU800_09000 | Not Available | Positive | 1895265 - 1896146 | 30787.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
