Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter atp-binding protein | EU800_00605 | Not Available | Negative | 123409 - 124440 | 37333.2 |
| choline abc transporter permease subunit | EU800_00610 | Not Available | Negative | 124437 - 125273 | 29992.7 |
| choline abc transporter substrate-binding protein | EU800_00615 | Not Available | Negative | 125350 - 126273 | 32406.9 |
| transcriptional regulator beti | EU800_00620 | Not Available | Positive | 126389 - 126970 | 20799.3 |
| choline-sulfatase | EU800_00625 | Not Available | Positive | 126967 - 128475 | 56801.9 |
| glutathione s-transferase family protein | EU800_00630 | Not Available | Positive | 128475 - 129116 | 23894.5 |
| betaine-aldehyde dehydrogenase | EU800_00635 | Not Available | Positive | 129113 - 130573 | 51537.2 |
| choline dehydrogenase | EU800_00640 | Not Available | Positive | 130573 - 132231 | 60602.7 |
| vitamin b12-dependent ribonucleotide reductase | EU800_00645 | Not Available | Positive | 132738 - 136427 | 133427.0 |
| hypothetical protein | EU800_00650 | Not Available | Positive | 137081 - 137701 | 22434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
