Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sp. IMCC6043 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964083 bp
Thymine Count
957996 bp
Guanine Count
1764620 bp
Cytosine Count
1777785 bp
Genome Length
5487753 bp
Protein-coding Genes
5044 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EU800_05715 | Not Available | Positive | 1205979 - 1206884 | 32958.1 |
| trap transporter substrate-binding protein | EU800_05720 | Not Available | Positive | 1206980 - 1207975 | 35500.3 |
| trap transporter small permease | EU800_05725 | Not Available | Positive | 1208028 - 1208495 | 17050.6 |
| trap transporter large permease | EU800_05730 | Not Available | Positive | 1208492 - 1209793 | 44988.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EU800_05735 | Not Available | Positive | 1209798 - 1210736 | 33353.5 |
| hypothetical protein | EU800_05740 | Not Available | Positive | 1210738 - 1212987 | 80882.1 |
| sdr family oxidoreductase | EU800_05745 | Not Available | Positive | 1213008 - 1213787 | 27422.2 |
| glutathione s-transferase family protein | EU800_05750 | Not Available | Negative | 1214121 - 1214795 | 25641.4 |
| voc family protein | EU800_05755 | Not Available | Negative | 1214821 - 1215402 | 22183.1 |
| phenylacetate--coa ligase family protein | EU800_05760 | Not Available | Negative | 1215442 - 1216761 | 47268.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
