Ciceribacter ferrooxidans

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter ferrooxidans is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure. The accession number for this organism is SDVB00000000.1, which serves as a reference for its genomic data. The classification of Ciceribacter ferrooxidans within the realm of microbiology highlights its significance in various ecological and biochemical contexts. Gram-negative bacteria are often known for their complex cell wall structure, which can influence their interactions with their environment, including their resistance to certain antibiotics and their role in biogeochemical cycles. From an ecological perspective, the presence of Ciceribacter ferrooxidans may suggest its involvement in processes such as iron oxidation, which could have implications for nutrient cycling and soil health. The study of this organism can provide insights into the microbial dynamics in environments where iron is abundant, potentially affecting the availability of essential nutrients for other organisms in the ecosystem. In summary, Ciceribacter ferrooxidans is a rod-shaped, Gram-negative bacterium with a single replicon that may play a role in iron biogeochemistry, contributing to our understanding of microbial communities and their functions in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter ferrooxidans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter ferrooxidans strain F8825

Gene Summary

Adenine Count

939169 bp

Thymine Count

945554 bp

Guanine Count

1616479 bp

Cytosine Count

1596973 bp

Genome Length

5122164 bp

Protein-coding Genes

4764 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-dehydro-4-deoxy-d-glucuronate isomeraseEUU22_02710Not AvailablePositive559305 - 56014130587.5
hypothetical proteinEUU22_02715Not AvailablePositive560138 - 56262192407.9
carbohydrate abc transporter substrate-binding proteinEUU22_02720Not AvailablePositive562704 - 56397245387.7
sugar abc transporter permeaseEUU22_02725Not AvailablePositive564104 - 56512637376.5
carbohydrate abc transporter permeaseEUU22_02730Not AvailablePositive565123 - 56617539260.9
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcEUU22_02735Not AvailablePositive566186 - 56727138566.8
n-alpha-acetyl diaminobutyric acid deacetylase doebEUU22_02740Not AvailableNegative567323 - 56833035512.7
ectoine hydrolase doeaEUU22_02745Not AvailableNegative568335 - 56951643862.5
ectoine utilization protein eutcEUU22_02750Not AvailableNegative569549 - 57053834804.1
hydroxyectoine utilization dehydratase eutbEUU22_02755Not AvailableNegative570535 - 57153934715.2

Displaying genes 641 – 650 of 4909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.