Ciceribacter ferrooxidans

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter ferrooxidans is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure. The accession number for this organism is SDVB00000000.1, which serves as a reference for its genomic data. The classification of Ciceribacter ferrooxidans within the realm of microbiology highlights its significance in various ecological and biochemical contexts. Gram-negative bacteria are often known for their complex cell wall structure, which can influence their interactions with their environment, including their resistance to certain antibiotics and their role in biogeochemical cycles. From an ecological perspective, the presence of Ciceribacter ferrooxidans may suggest its involvement in processes such as iron oxidation, which could have implications for nutrient cycling and soil health. The study of this organism can provide insights into the microbial dynamics in environments where iron is abundant, potentially affecting the availability of essential nutrients for other organisms in the ecosystem. In summary, Ciceribacter ferrooxidans is a rod-shaped, Gram-negative bacterium with a single replicon that may play a role in iron biogeochemistry, contributing to our understanding of microbial communities and their functions in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter ferrooxidans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter ferrooxidans strain F8825

Gene Summary

Adenine Count

939169 bp

Thymine Count

945554 bp

Guanine Count

1616479 bp

Cytosine Count

1596973 bp

Genome Length

5122164 bp

Protein-coding Genes

4764 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyphenylacetyl-coa thioesterase paaiEUU22_00450Not AvailableNegative90604 - 9103515534.4
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseEUU22_00455Not AvailableNegative91038 - 9183228267.8
phenylacetic acid degradation protein paanEUU22_00460Not AvailablePositive91934 - 9358657914.5
abc transporter substrate-binding proteinEUU22_00465Not AvailablePositive93623 - 9475939181.8
branched-chain amino acid abc transporter permeaseEUU22_00470Not AvailablePositive94860 - 9573230184.0
branched-chain amino acid abc transporter permeaseEUU22_00475Not AvailablePositive95729 - 9669133352.8
abc transporter atp-binding proteinEUU22_00480Not AvailablePositive96688 - 9747327720.5
abc transporter atp-binding proteinEUU22_00485Not AvailablePositive97460 - 9816125384.1
3-hydroxyacyl-coa dehydrogenaseEUU22_00490Not AvailablePositive98168 - 10010867954.9
duf1778 domain-containing proteinEUU22_00495Not AvailablePositive100443 - 10080813480.5

Displaying genes 231 – 240 of 4909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.