Ciceribacter ferrooxidans

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Ciceribacter

Description

Ciceribacter ferrooxidans is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure. The accession number for this organism is SDVB00000000.1, which serves as a reference for its genomic data. The classification of Ciceribacter ferrooxidans within the realm of microbiology highlights its significance in various ecological and biochemical contexts. Gram-negative bacteria are often known for their complex cell wall structure, which can influence their interactions with their environment, including their resistance to certain antibiotics and their role in biogeochemical cycles. From an ecological perspective, the presence of Ciceribacter ferrooxidans may suggest its involvement in processes such as iron oxidation, which could have implications for nutrient cycling and soil health. The study of this organism can provide insights into the microbial dynamics in environments where iron is abundant, potentially affecting the availability of essential nutrients for other organisms in the ecosystem. In summary, Ciceribacter ferrooxidans is a rod-shaped, Gram-negative bacterium with a single replicon that may play a role in iron biogeochemistry, contributing to our understanding of microbial communities and their functions in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusCiceribacter
SpeciesCiceribacter ferrooxidans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ciceribacter ferrooxidans strain F8825

Gene Summary

Adenine Count

939169 bp

Thymine Count

945554 bp

Guanine Count

1616479 bp

Cytosine Count

1596973 bp

Genome Length

5122164 bp

Protein-coding Genes

4764 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorEUU22_05415Not AvailableNegative1105197 - 110665454251.9
hydrogenase maturation proteinEUU22_05420Not AvailableNegative1106654 - 110834561261.5
hydrogenase expression/formation protein hypeEUU22_05425Not AvailableNegative1108351 - 110939136184.5
hydrogenase formation protein hypdEUU22_05430Not AvailableNegative1109400 - 111055742313.1
hypc/hybg/hupf family hydrogenase formation chaperoneEUU22_05435Not AvailableNegative1110554 - 11107817973.76
carbamoyltransferase hypfEUU22_05440Not AvailableNegative1110784 - 111304880483.5
hydrogenase nickel incorporation protein hypbEUU22_05445Not AvailableNegative1113051 - 111397733010.8
hydrogenase maturation nickel metallochaperone hypaEUU22_05450Not AvailableNegative1113977 - 111431812405.0
hydrogenase assembly protein hupfEUU22_05455Not AvailableNegative1114311 - 111540838257.7
[nife]-hydrogenase assembly, chaperone, hybeEUU22_05460Not AvailableNegative1115405 - 111592618267.7

Displaying genes 1171 – 1180 of 4909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.