Microbacterium protaetiae

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium protaetiae is a rod-shaped bacterium characterized by a single replicon. The genomic data for this species is cataloged under the accession number NZ_CP035494.1. This classification reflects its placement within the Microbacterium genus, which is known for its diversity and presence in various environments. The morphology of M. protaetiae, being rod-shaped, is typical of many members of the Microbacterium genus, which often exhibit a range of shapes and sizes. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its adaptability in different ecological niches. Microbacterium species are often isolated from soil, water, and even plant materials, indicating their ecological role in nutrient cycling and organic matter decomposition. The specific ecological role of M. protaetiae remains to be fully understood; however, its rod shape may facilitate mobility and colonization in various habitats. In summary, Microbacterium protaetiae, with its rod shape and single replicon, is part of a genus known for its ecological versatility. Understanding the traits of this bacterium can provide insights into its potential contributions to environmental processes, particularly in the context of nutrient cycling and microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium protaetiae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium protaetiae strain DFW100M-13 chromosome, complete

Gene Summary

Adenine Count

604850 bp

Thymine Count

608147 bp

Guanine Count

1289384 bp

Cytosine Count

1288102 bp

Genome Length

3790483 bp

Protein-coding Genes

3505 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenase subunit alphaET475_RS04410Not AvailableNegative967040 - 96759419896.3
protocatechuate 3,4-dioxygenase subunit betaET475_RS04415Not AvailableNegative967594 - 96841531075.2
iclr family transcriptional regulatorET475_RS04420Not AvailableNegative968499 - 96925727259.9
marr family winged helix-turn-helix transcriptional regulatorET475_RS04425Not AvailableNegative969533 - 96999716720.0
fad-dependent monooxygenaseET475_RS04430Not AvailableNegative969994 - 97187768538.2
iclr family transcriptional regulatorET475_RS04435Not AvailablePositive971971 - 97271726533.1
4-hydroxybenzoate 3-monooxygenaseET475_RS04440Not AvailablePositive972948 - 97413243276.6
sdr family nad(p)-dependent oxidoreductaseET475_RS04445Not AvailableNegative974181 - 97498427562.0
phenylacetate--coa ligase family proteinET475_RS04450Not AvailableNegative975000 - 97632547164.6
pep/pyruvate-binding domain-containing proteinET475_RS04455Not AvailableNegative976318 - 97741539244.7

Displaying genes 881 – 890 of 3559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.