Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter substrate-binding proteinEOW66_12915Not AvailablePositive2659449 - 266037531671.9
abc transporter permeaseEOW66_12920Not AvailablePositive2660437 - 266154038338.0
sugar abc transporter atp-binding proteinEOW66_12925Not AvailablePositive2661581 - 266236027967.9
5-dehydro-2-deoxygluconokinaseEOW66_12930Not AvailablePositive2662480 - 266439668732.8
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)EOW66_12935Not AvailablePositive2664399 - 266623164334.8
myo-inosose-2 dehydrataseEOW66_12940Not AvailablePositive2666254 - 266715632168.2
5-deoxy-glucuronate isomeraseEOW66_12945Not AvailablePositive2667184 - 266799029846.1
hydroxypyruvate isomeraseEOW66_12950Not AvailablePositive2668015 - 266879428189.9
tetr/acrr family transcriptional regulatorEOW66_12955Not AvailableNegative2668784 - 266943723284.4
hlyd family efflux transporter periplasmic adaptor subunitEOW66_12960Not AvailablePositive2669540 - 267052633750.2

Displaying genes 2621 – 2630 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.