Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinEOW66_00620Not AvailablePositive131916 - 13255423935.4
oxidoreductaseEOW66_00625Not AvailablePositive132635 - 13367536199.6
amino acid abc transporter atp-binding proteinEOW66_00630Not AvailableNegative133769 - 13449126309.2
amino acid abc transporter permeaseEOW66_00635Not AvailableNegative134484 - 13513723769.1
amino acid abc transporter permeaseEOW66_00640Not AvailableNegative135151 - 13581624472.7
transporter substrate-binding domain-containing proteinEOW66_00645Not AvailableNegative135893 - 13669928784.2
aldehyde dehydrogenase (nadp(+))EOW66_00650Not AvailablePositive136946 - 13846052991.6
alkylphosphonate utilization proteinEOW66_00655Not AvailablePositive138540 - 13888112085.4
tripartite tricarboxylate transporter permeaseEOW66_00660Not AvailableNegative139227 - 14077753477.6
tripartite tricarboxylate transporter tctb family proteinEOW66_00665Not AvailableNegative140787 - 14121814627.4

Displaying genes 251 – 260 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.