Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinEOW66_11550Not AvailablePositive2366724 - 236706512126.1
hypothetical proteinEOW66_11555Not AvailablePositive2367157 - 236766617958.0
glycoside hydrolaseEOW66_11560Not AvailablePositive2367762 - 236859530229.3
fad-dependent oxidoreductaseEOW66_11565Not AvailableNegative2368757 - 237125892534.8
d-glycerate dehydrogenaseEOW66_11570Not AvailableNegative2371434 - 237242636122.2
hypothetical proteinEOW66_11575Not AvailablePositive2372627 - 237316919392.0
cation diffusion facilitator family transporterEOW66_11580Not AvailablePositive2373222 - 237411831615.6
m3 family peptidaseEOW66_11585Not AvailableNegative2374186 - 237620474155.0
amino acid abc transporter permeaseEOW66_11590Not AvailableNegative2376352 - 237713428190.5
transporter substrate-binding domain-containing proteinEOW66_11595Not AvailableNegative2377131 - 237790727930.4

Displaying genes 2351 – 2360 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.