Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinEOW66_09255Not AvailableNegative1907130 - 190794830301.9
long-chain fatty acid--coa ligaseEOW66_09260Not AvailableNegative1907945 - 190991872914.8
response regulatorEOW66_09265Not AvailablePositive1910114 - 191202167919.9
response regulator transcription factorEOW66_09270Not AvailablePositive1912018 - 191272225891.0
wgr domain-containing proteinEOW66_09275Not AvailablePositive1912789 - 19130289124.86
saccharopine dehydrogenaseEOW66_09280Not AvailablePositive1913040 - 191418241256.6
rna pseudouridine synthaseEOW66_09285Not AvailableNegative1914336 - 191498924760.8
lyse family translocatorEOW66_09290Not AvailableNegative1915027 - 191563820791.0
rida family proteinEOW66_09295Not AvailableNegative1915676 - 191608013932.8
abc transporter substrate-binding proteinEOW66_09300Not AvailablePositive1916333 - 191731635170.0

Displaying genes 1901 – 1910 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.