Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEOW66_08855Not AvailablePositive1827141 - 182766518295.8
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnEOW66_08860Not AvailablePositive1827788 - 182896943971.0
glycosyltransferase family 39 proteinEOW66_08865Not AvailableNegative1829024 - 183058954823.0
log family proteinEOW66_08870Not AvailableNegative1830591 - 183141530951.2
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEOW66_08875Not AvailablePositive1831507 - 183233429431.4
hypothetical proteinEOW66_08880Not AvailablePositive1832385 - 183275313227.5
lytic murein transglycosylaseEOW66_08885Not AvailablePositive1832834 - 183409945455.9
nnru family proteinEOW66_08890Not AvailableNegative1834109 - 183479524881.1
duf4202 domain-containing proteinEOW66_08895Not AvailablePositive1834868 - 183543120717.7
dmt family transporterEOW66_08900Not AvailableNegative1835428 - 183629429775.7

Displaying genes 1821 – 1830 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.