Paenirhodobacter huangdaonensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter huangdaonensis is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure. The genomic data for this species is cataloged under the accession number SAVA00000000.1, which provides a reference for researchers interested in its genetic makeup and potential applications. This organism is part of the diverse group of bacteria known for their ecological roles, particularly in various environmental niches. The specific traits of Paenirhodobacter huangdaonensis highlight its potential adaptability and survival in different habitats. The presence of only one replicon may suggest an efficient replication strategy, which can be advantageous in fluctuating environments. Understanding the genomic characteristics of Paenirhodobacter huangdaonensis can offer insights into its metabolic capabilities and ecological interactions. The simplification of its genomic architecture could imply a specialization for particular environmental conditions, possibly influencing its role in nutrient cycling or interactions with other microorganisms. This underscores the importance of studying such bacteria to comprehend their contributions to ecosystem dynamics and their potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter huangdaonensis strain CGMCC 1.12963 Scaffold35,

Gene Summary

Adenine Count

663520 bp

Thymine Count

656704 bp

Guanine Count

1410776 bp

Cytosine Count

1416126 bp

Genome Length

4149562 bp

Protein-coding Genes

3837 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter permease pstaEOW66_07705Not AvailableNegative1591362 - 159270847294.5
phosphate abc transporter permease subunit pstcEOW66_07710Not AvailableNegative1592705 - 159416551443.1
phosphonate abc transporter substrate-binding proteinEOW66_07715Not AvailableNegative1594230 - 159528236818.5
cobalamin biosynthesis protein cbixEOW66_07720Not AvailableNegative1595403 - 159608624202.3
eve domain-containing proteinEOW66_07725Not AvailableNegative1596345 - 159676415656.7
ycii family proteinEOW66_07730Not AvailableNegative1596764 - 15970339509.39
nad(p)-dependent glycerol-3-phosphate dehydrogenaseEOW66_07735Not AvailableNegative1597035 - 159799132633.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadEOW66_07740Not AvailableNegative1597988 - 159908237356.1
uroporphyrinogen-iii synthaseEOW66_07745Not AvailablePositive1599155 - 159989224994.1
hypothetical proteinEOW66_07750Not AvailablePositive1599971 - 160120040865.2

Displaying genes 1591 – 1600 of 3979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.