Agrobacterium sp. CNPSo 2736

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. CNPSo 2736 is a Gram-negative, rod-shaped bacterium recognized for its motility due to the presence of flagella. This characteristic allows the organism to navigate its environment, which is integral to its ecological interactions. The bacterium possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to its surroundings. The accession number for Agrobacterium sp. CNPSo 2736 is RZTX00000000.1, which serves as a unique identifier for genomic data associated with this strain. This bacterium belongs to the genus Agrobacterium, known for its role in genetic transformation of plants through the transfer of T-DNA (transferred DNA) from its plasmid into plant cells, a process that has significant implications for biotechnology and agriculture. Ecologically, Agrobacterium sp. CNPSo 2736 may contribute to plant-microbe interactions, potentially enhancing plant growth or contributing to disease processes. The motility provided by its flagella could facilitate its colonization of plant roots or other surfaces, allowing for effective communication and symbiosis with host plants. Understanding the traits of this bacterium can lead to insights into its functional roles in ecosystems and its potential applications in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. CNPSo 2736
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. CNPSo 2736
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp. CNPSo 2736 scaffold_49, whole genome shotgun

Gene Summary

Adenine Count

1113760 bp

Thymine Count

1121500 bp

Guanine Count

1666771 bp

Cytosine Count

1665571 bp

Genome Length

5567602 bp

Protein-coding Genes

5085 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidaseEM858_08445Not AvailablePositive1745286 - 174599925848.1
malate synthase gEM858_08450Not AvailableNegative1746077 - 174824578526.6
duf1402 family proteinEM858_08455Not AvailableNegative1748365 - 174933035464.7
atp-dependent protease atpase subunit hsluEM858_08460Not AvailableNegative1749530 - 175083748019.7
atp-dependent protease subunit hslvEM858_08465Not AvailableNegative1750916 - 175144018649.5
imidazoleglycerol-phosphate dehydratase hisbEM858_08470Not AvailablePositive1751642 - 175223821740.9
duf2628 domain-containing proteinEM858_08475Not AvailablePositive1752261 - 175275518109.9
imidazole glycerol phosphate synthase subunit hishEM858_08480Not AvailablePositive1752757 - 175340723147.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseEM858_08485Not AvailablePositive1753409 - 175415225909.2
imidazole glycerol phosphate synthase subunit hisfEM858_08490Not AvailablePositive1754149 - 175492527293.5

Displaying genes 1711 – 1720 of 5216 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.