Labedella phragmitis str. 11W25H-1

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella phragmitis strain 11W25H-1 is a Gram-positive bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, indicating a streamlined genetic structure, which may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession number RZNB00000000.1. As a member of the Labedella genus, L. phragmitis is likely associated with specific ecological niches, particularly in environments rich in organic material, such as wetlands or marshes where Phragmites (common reed) is prevalent. The Gram-positive nature of this bacterium suggests that it may have a thick peptidoglycan layer, which provides structural support and may also play a role in its interactions with other microorganisms and the surrounding environment. Understanding the characteristics of Labedella phragmitis str. 11W25H-1 contributes to our knowledge of microbial diversity and its ecological roles, particularly in relation to plant-associated bacteria. This information could be valuable in exploring biotechnological applications, such as bioremediation or plant growth promotion, by leveraging the unique traits of this Gram-positive rod. Further research could elucidate its specific functions and interactions within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella phragmitis
Strain11W25H-1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella phragmitis strain 11W25H-1 scaffold_17, whole genome

Gene Summary

Adenine Count

542348 bp

Thymine Count

545232 bp

Guanine Count

1216424 bp

Cytosine Count

1220304 bp

Genome Length

3525574 bp

Protein-coding Genes

3172 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme-binding proteinELQ90_15525Not AvailableNegative3318482 - 331888913282.9
zinc-binding alcohol dehydrogenase family proteinELQ90_15530Not AvailableNegative3318907 - 331995037019.2
sdr family oxidoreductaseELQ90_15535Not AvailableNegative3320102 - 332098630640.6
sdr family oxidoreductaseELQ90_15540Not AvailableNegative3320896 - 332173529591.8
xre family transcriptional regulatorELQ90_15545Not AvailablePositive3321752 - 332272035443.9
tetr family transcriptional regulatorELQ90_15550Not AvailableNegative3322921 - 332353522236.5
mbl fold metallo-hydrolaseELQ90_15555Not AvailablePositive3323610 - 332446130050.2
fadr family transcriptional regulatorELQ90_15560Not AvailableNegative3324810 - 332543622320.3
apc family permeaseELQ90_15565Not AvailableNegative3325574 - 332696847867.2
carbon-nitrogen hydrolase family proteinELQ90_15570Not AvailableNegative3327155 - 332793727707.1

Displaying genes 3061 – 3070 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.