Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diguanylate cyclase/phosphodiesteraseEKL29_17345Not AvailableNegative3695233 - 369735677045.9
bifunctional diguanylate cyclase/phosphodiesteraseEKL29_17350Not AvailableNegative3697512 - 369955775136.1
scpu domain-containing proteinEKL29_17355Not AvailablePositive3700092 - 370066119222.5
scpu domain-containing proteinEKL29_17360Not AvailablePositive3700684 - 370119917577.9
molecular chaperoneEKL29_17365Not AvailablePositive3701221 - 370191325370.5
fimbrial biogenesis outer membrane usher proteinEKL29_17370Not AvailablePositive3701914 - 370436488247.5
spore coat u domain-containing proteinEKL29_17375Not AvailablePositive3704361 - 370533533241.4
mfs transporterEKL29_17380Not AvailableNegative3705332 - 370665448004.9
tonb system transport protein exbdEKL29_17385Not AvailableNegative3706947 - 370736915386.8
biopolymer transporter exbbEKL29_17390Not AvailableNegative3707373 - 370811626187.8

Displaying genes 3521 – 3530 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.