Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna pseudouridine(516) synthase rsuaEKL29_13965Not AvailableNegative2961927 - 296264626949.1
dead/deah box helicaseEKL29_13970Not AvailablePositive2962811 - 296456565912.9
50s ribosomal protein l25EKL29_13975Not AvailablePositive2964696 - 296498010500.7
nucleoid-associated protein yejkEKL29_13980Not AvailableNegative2965053 - 296605737791.5
duf1414 domain-containing proteinEKL29_13985Not AvailablePositive2966216 - 29664438253.76
duf3413 domain-containing proteinEKL29_13990Not AvailablePositive2966465 - 296821966054.5
Trna-proNot AvailableNot AvailablePositive2968291 - 2968367Not Available
hypothetical proteinEKL29_14000Not AvailablePositive2968904 - 296936216827.4
duf1493 family proteinEKL29_14005Not AvailablePositive2969356 - 296968813041.5
type vi secretion system tube protein hcpEKL29_14010Not AvailablePositive2969710 - 297019518102.3

Displaying genes 2871 – 2880 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.