Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sn-glycerol-3-phosphate abc transporter permease ugpeEKL29_12185Not AvailableNegative2566058 - 256690331327.2
sn-glycerol-3-phosphate abc transporter permease ugpaEKL29_12190Not AvailableNegative2566900 - 256778733082.9
sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpbEKL29_12195Not AvailableNegative2567850 - 256916648246.2
high-affinity branched-chain amino acid abc transporter atp-binding protein livfEKL29_12200Not AvailableNegative2569441 - 257015425995.6
abc transporter atp-binding proteinEKL29_12205Not AvailableNegative2570156 - 257092328302.8
high-affinity branched-chain amino acid abc transporter permease livmEKL29_12210Not AvailableNegative2570920 - 257218846103.2
high-affinity branched-chain amino acid abc transporter permease livhEKL29_12215Not AvailableNegative2572185 - 257311132888.4
branched-chain amino acid abc transporter substrate-binding proteinEKL29_12220Not AvailableNegative2573183 - 257431039598.2
aspartate 1-decarboxylase autocleavage activator panmEKL29_12225Not AvailablePositive2574711 - 257509714389.1
rna polymerase sigma factor rpohEKL29_12230Not AvailableNegative2575136 - 257599332631.1

Displaying genes 2521 – 2530 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.