Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseEKL29_11380Not AvailablePositive2398799 - 239965329466.2
abc transporter atp-binding proteinEKL29_11385Not AvailablePositive2399650 - 240126358835.1
putative fmn-dependent luciferase-like monooxygenaseEKL29_11390Not AvailablePositive2401260 - 240227036463.3
alkylhydroperoxidase domain proteinEKL29_11395Not AvailablePositive2402267 - 240337939991.1
amidohydrolaseEKL29_11400Not AvailablePositive2403376 - 240451841431.5
voc family proteinEKL29_11405Not AvailablePositive2404539 - 240538731083.6
glycoside hydrolase family 10 proteinEKL29_11410Not AvailablePositive2405476 - 240679549179.4
type ii toxin-antitoxin system antitoxin hipbEKL29_11415Not AvailablePositive2406904 - 24071409084.89
type ii toxin-antitoxin system hipa family toxinEKL29_11420Not AvailablePositive2407140 - 240844748120.3
ferric-rhodotorulic acid/ferric-coprogen receptor fhueEKL29_11425Not AvailableNegative2408833 - 241105582065.9

Displaying genes 2361 – 2370 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.