Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paar domain-containing proteinEKL29_09385Not AvailableNegative1984362 - 19846228701.32
hypothetical proteinEKL29_09390Not AvailableNegative1984737 - 198509313352.9
hypothetical proteinEKL29_09395Not AvailableNegative1985303 - 198628637672.2
hypothetical proteinEKL29_09400Not AvailableNegative1986394 - 198792056099.8
type vi secretion system tip protein vgrgEKL29_09405Not AvailableNegative1987923 - 199042491850.3
type vi secretion system atpase tsshEKL29_09410Not AvailableNegative1990421 - 199307297831.5
hcp family type vi secretion system effectorEKL29_09415Not AvailableNegative1993244 - 199373518772.0
ompa family proteinEKL29_09420Not AvailableNegative1993741 - 199545361947.1
dotu family type iv/vi secretion system proteinEKL29_09425Not AvailableNegative1995450 - 199613925522.7
type vi secretion system baseplate subunit tsskEKL29_09430Not AvailableNegative1996136 - 199747650513.8

Displaying genes 2031 – 2040 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.