Pantoea sp. YU22

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. YU22 is characterized by the presence of flagella, which suggests that this bacterium possesses motility capabilities. This trait can be significant for its ecological interactions and colonization abilities in various environments. Additionally, Pantoea sp. YU22 has one replicon, indicating a relatively simple genomic structure that may influence its replication and genetic stability. The genomic information for Pantoea sp. YU22 is accessible under the accession number RYDU00000000.1, which allows for further investigation into its genetic makeup and potential functional attributes. Understanding the genetic characteristics and motility of Pantoea sp. YU22 may provide insights into its ecological roles, such as its potential for plant interaction or its involvement in biogeochemical cycles. Overall, the traits of Pantoea sp. YU22 suggest that it is adapted for movement and may play a role in its surrounding ecosystem, possibly engaging in interactions with plants or other microorganisms. The presence of flagella and a single replicon may facilitate its adaptability and survival in diverse environments, highlighting the importance of motility in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. YU22
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. YU22 NODE_92_length_388_cov_1869.84, whole genome

Gene Summary

Adenine Count

1028510 bp

Thymine Count

1018368 bp

Guanine Count

1367199 bp

Cytosine Count

1375263 bp

Genome Length

4793629 bp

Protein-coding Genes

4245 genes

Non-Coding Genes

258 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yaii/yqxd family proteinEKL29_07320Not AvailablePositive1540341 - 154079016622.9
duf2076 domain-containing proteinEKL29_07325Not AvailableNegative1540793 - 154152126630.3
shikimate kinase arolEKL29_07330Not AvailablePositive1541802 - 154232619146.9
hypothetical proteinEKL29_07335Not AvailablePositive1542450 - 15426417115.22
iclr family transcriptional regulatorEKL29_07340Not AvailablePositive1542913 - 154367427543.1
opt family oligopeptide transporterEKL29_07345Not AvailablePositive1543840 - 154539654547.6
duf1177 domain-containing proteinEKL29_07350Not AvailablePositive1545409 - 154633832830.2
arom family proteinEKL29_07355Not AvailablePositive1546341 - 154701824438.6
pyrimidine/purine nucleoside phosphorylaseEKL29_07360Not AvailablePositive1547124 - 154741410503.3
recombination-associated protein rdgcEKL29_07365Not AvailableNegative1547444 - 154835534046.0

Displaying genes 1671 – 1680 of 4507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.