Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | EJI01_04985 | Not Available | Negative | 1045813 - 1046463 | 22320.9 |
| stp1/irep family pp2c-type ser/thr phosphatase | EJI01_04990 | Not Available | Negative | 1046493 - 1047302 | 28316.7 |
| terc family protein | EJI01_04995 | Not Available | Negative | 1047332 - 1048015 | 23968.0 |
| succinate--coa ligase subunit alpha | EJI01_05000 | Not Available | Negative | 1048107 - 1049000 | 31141.9 |
| adp-forming succinate--coa ligase subunit beta | EJI01_05005 | Not Available | Negative | 1049010 - 1050176 | 41161.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EJI01_05010 | Not Available | Positive | 1050369 - 1051298 | 33216.4 |
| recombination regulator recx | EJI01_05015 | Not Available | Negative | 1051326 - 1051775 | 16576.8 |
| recombinase reca | EJI01_05020 | Not Available | Negative | 1051786 - 1052850 | 37803.8 |
| marr family transcriptional regulator | EJI01_05025 | Not Available | Positive | 1052998 - 1053483 | 17652.1 |
| response regulator transcription factor | EJI01_05030 | Not Available | Positive | 1053508 - 1054179 | 24548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
