Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | EJI01_04935 | Not Available | Negative | 1034533 - 1035135 | 22130.6 |
| lipopolysaccharide biosynthesis protein | EJI01_04940 | Not Available | Negative | 1035135 - 1036376 | 44149.9 |
| degt/dnrj/eryc1/strs family aminotransferase | EJI01_04945 | Not Available | Negative | 1036419 - 1037513 | 39766.9 |
| n-acetyltransferase | EJI01_04950 | Not Available | Negative | 1037522 - 1038094 | 20400.3 |
| gfo/idh/moca family oxidoreductase | EJI01_04955 | Not Available | Negative | 1038100 - 1039047 | 35362.0 |
| nucleotide sugar dehydrogenase | EJI01_04960 | Not Available | Negative | 1039050 - 1040345 | 47223.5 |
| polysaccharide biosynthesis protein | EJI01_04965 | Not Available | Negative | 1040348 - 1042174 | 65788.7 |
| hypothetical protein | EJI01_04970 | Not Available | Negative | 1042324 - 1044090 | 64848.2 |
| pilin | EJI01_04975 | Not Available | Negative | 1044141 - 1044614 | 15863.2 |
| 3',5'-cyclic-nucleotide phosphodiesterase | EJI01_04980 | Not Available | Negative | 1044817 - 1045623 | 28942.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
