Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EJI01_04735 | Not Available | Negative | 989125 - 989748 | 23424.6 |
| hypothetical protein | EJI01_04740 | Not Available | Positive | 989786 - 990010 | 7920.26 |
| pas domain s-box protein | EJI01_04745 | Not Available | Negative | 989912 - 991978 | 76077.6 |
| carbon-nitrogen hydrolase family protein | EJI01_04750 | Not Available | Negative | 991990 - 992805 | 29695.5 |
| tigr02099 family protein | EJI01_04755 | Not Available | Negative | 992834 - 996958 | 146518.0 |
| bifunctional | EJI01_04760 | Not Available | Positive | 996984 - 999743 | 103498.0 |
| septal ring lytic transglycosylase rlpa family protein | EJI01_04765 | Not Available | Positive | 999736 - 1000770 | 36377.4 |
| rna polymerase sigma-70 factor | EJI01_04770 | Not Available | Negative | 1000775 - 1001701 | 34673.5 |
| ferritin-like domain-containing protein | EJI01_04775 | Not Available | Negative | 1001760 - 1002617 | 33633.1 |
| glutathione peroxidase | EJI01_04780 | Not Available | Positive | 1002745 - 1003332 | 21270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
