Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_04685 | Not Available | Positive | 979100 - 979339 | 8372.0 |
| hypothetical protein | EJI01_04690 | Not Available | Negative | 979376 - 980080 | 26153.9 |
| helix-turn-helix domain-containing protein | EJI01_04695 | Not Available | Negative | 980073 - 980558 | 17333.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | EJI01_04700 | Not Available | Negative | 980620 - 983337 | 98210.2 |
| lrp/asnc family transcriptional regulator | EJI01_04705 | Not Available | Positive | 983444 - 983908 | 17087.0 |
| hypothetical protein | EJI01_04710 | Not Available | Negative | 983979 - 985190 | 43696.2 |
| ubia family prenyltransferase | EJI01_04715 | Not Available | Negative | 985294 - 986709 | 51425.5 |
| 4-amino-4-deoxy-l-arabinose transferase | EJI01_04720 | Not Available | Negative | 986714 - 987088 | 12920.4 |
| transglycosylase | EJI01_04725 | Not Available | Negative | 987134 - 988276 | 41322.3 |
| ompa family protein | EJI01_04730 | Not Available | Positive | 988475 - 989128 | 22308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
