Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_04635 | Not Available | Negative | 968740 - 969066 | 12573.7 |
| formyl-coa transferase | EJI01_04640 | Not Available | Negative | 969241 - 970488 | 45420.5 |
| pas domain s-box protein | EJI01_04645 | Not Available | Negative | 970485 - 970928 | 16240.4 |
| formyl-coa transferase | EJI01_04650 | Not Available | Negative | 970951 - 972228 | 47084.1 |
| oxalyl-coa decarboxylase | EJI01_04655 | Not Available | Negative | 972254 - 974041 | 62590.6 |
| crp/fnr family transcriptional regulator | EJI01_04660 | Not Available | Positive | 974197 - 974805 | 23100.3 |
| bon domain-containing protein | EJI01_04665 | Not Available | Negative | 974802 - 975638 | 30609.8 |
| tripartite tricarboxylate transporter permease | EJI01_04670 | Not Available | Negative | 975655 - 977184 | 53867.9 |
| tripartite tricarboxylate transporter tctb family protein | EJI01_04675 | Not Available | Negative | 977206 - 977727 | 19019.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_04680 | Not Available | Negative | 977826 - 978857 | 36848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
