Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | EJI01_00415 | Not Available | Positive | 88144 - 89682 | 55237.5 |
| d-alanyl-d-alanine carboxypeptidase | EJI01_00420 | Not Available | Positive | 89799 - 90968 | 41824.2 |
| iclr family transcriptional regulator | EJI01_00425 | Not Available | Negative | 90987 - 91781 | 28994.0 |
| arginyltransferase | EJI01_00430 | Not Available | Negative | 91811 - 92560 | 28353.9 |
| leucyl/phenylalanyl-trna--protein transferase | EJI01_00435 | Not Available | Negative | 92557 - 93312 | 27811.5 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EJI01_00440 | Not Available | Positive | 93422 - 95752 | 81986.8 |
| 4-hydroxybenzoate 3-monooxygenase | EJI01_00445 | Not Available | Negative | 95759 - 96940 | 43881.2 |
| iclr family transcriptional regulator | EJI01_00450 | Not Available | Positive | 97062 - 97832 | 28077.2 |
| response regulator | EJI01_00455 | Not Available | Positive | 97894 - 98553 | 24537.9 |
| two-component sensor histidine kinase | EJI01_00460 | Not Available | Positive | 98636 - 99949 | 46633.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
