Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| azld domain-containing protein | EJI01_04430 | Not Available | Negative | 926420 - 926764 | 12302.2 |
| branched-chain amino acid abc transporter permease | EJI01_04435 | Not Available | Negative | 926767 - 927507 | 26530.9 |
| methionyl-trna formyltransferase | EJI01_04440 | Not Available | Negative | 927596 - 928546 | 33040.7 |
| hypothetical protein | EJI01_04445 | Not Available | Negative | 928554 - 929063 | 18302.0 |
| peptide deformylase | EJI01_04450 | Not Available | Negative | 929060 - 929593 | 19891.0 |
| lysm peptidoglycan-binding domain-containing protein | EJI01_04455 | Not Available | Positive | 929756 - 930973 | 44391.7 |
| duf494 domain-containing protein | EJI01_04465 | Not Available | Positive | 932189 - 932704 | 18700.1 |
| duf1631 domain-containing protein | EJI01_04470 | Not Available | Negative | 932799 - 935186 | 85535.7 |
| protein translocase subunit secf | EJI01_04475 | Not Available | Negative | 935315 - 936268 | 35095.0 |
| protein translocase subunit secd | EJI01_04480 | Not Available | Negative | 936277 - 938157 | 67514.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
