Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | EJI01_04330 | Not Available | Negative | 905103 - 906293 | 42060.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EJI01_04335 | Not Available | Negative | 906385 - 906927 | 18429.3 |
| tetratricopeptide repeat protein | EJI01_04340 | Not Available | Positive | 906964 - 907884 | 33776.2 |
| meta domain-containing protein | EJI01_04345 | Not Available | Positive | 907984 - 908424 | 15564.4 |
| hypothetical protein | EJI01_04350 | Not Available | Positive | 908588 - 910390 | 65325.4 |
| phosphatase pap2 family protein | EJI01_04355 | Not Available | Positive | 910410 - 911453 | 37825.8 |
| hypothetical protein | EJI01_04360 | Not Available | Positive | 911450 - 913330 | 67151.1 |
| crp/fnr family transcriptional regulator | EJI01_04365 | Not Available | Negative | 913357 - 914019 | 24353.7 |
| luxr family transcriptional regulator | EJI01_04370 | Not Available | Negative | 914060 - 914731 | 24401.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EJI01_04375 | Not Available | Negative | 914843 - 915748 | 32833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
