Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | EJI01_04280 | Not Available | Negative | 893732 - 895198 | 51227.7 |
| duf1800 domain-containing protein | EJI01_04285 | Not Available | Negative | 895210 - 897042 | 65097.0 |
| orotidine-5'-phosphate decarboxylase | EJI01_04290 | Not Available | Negative | 897229 - 898053 | 29622.5 |
| uracil-dna glycosylase | EJI01_04295 | Not Available | Negative | 898093 - 898857 | 26569.1 |
| gnat family n-acetyltransferase | EJI01_04300 | Not Available | Negative | 898854 - 899429 | 20831.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EJI01_04305 | Not Available | Negative | 899426 - 900139 | 24535.5 |
| dmt family transporter | EJI01_04310 | Not Available | Negative | 900136 - 901128 | 34175.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EJI01_04315 | Not Available | Positive | 901246 - 902643 | 49369.5 |
| esterase | EJI01_04320 | Not Available | Positive | 902763 - 904097 | 46000.1 |
| threonylcarbamoyl-amp synthase | EJI01_04325 | Not Available | Negative | 904105 - 905106 | 34684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
