Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI01_04180 | Not Available | Negative | 871219 - 872181 | 34277.2 |
| 3-hydroxybenzoate 6-monooxygenase | EJI01_04185 | Not Available | Negative | 872178 - 873431 | 45463.2 |
| faa hydrolase family protein | EJI01_04190 | Not Available | Negative | 873460 - 874164 | 25530.6 |
| gentisate 1,2-dioxygenase | EJI01_04195 | Not Available | Negative | 874230 - 875300 | 39423.9 |
| lysr family transcriptional regulator | EJI01_04200 | Not Available | Positive | 875426 - 876340 | 33799.0 |
| acyl-coa thioesterase | EJI01_04205 | Not Available | Positive | 876385 - 876834 | 16064.2 |
| response regulator | EJI01_04210 | Not Available | Positive | 877119 - 882089 | 177470.0 |
| response regulator | EJI01_04215 | Not Available | Positive | 881999 - 884335 | 84312.7 |
| hypothetical protein | EJI01_04220 | Not Available | Negative | 884269 - 884955 | 24661.7 |
| response regulator transcription factor | EJI01_04225 | Not Available | Negative | 884952 - 885314 | 12764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
